CDS

Accession Number TCMCG013C29696
gbkey CDS
Protein Id XP_024957503.1
Location complement(join(19989061..19989450,19989911..19990069,19990772..19990874,19991740..19991820,19992559..19992635,19992720..19992791,19992880..19992956,19993665..19993725,19994765..19994862,19995037..19995144,19996033..19996319,19996420..19996485,19997457..19997536,19998882..19999054,20000050..20000081,20000223..20000383,20001084..20001248,20001382..20001446,20002099..20002227,20003633..20003739,20004694..20004817,20005332..20005410,20006280..20006379,20006939..20007021,20007296..20007346,20007784..20008212,20008896..20009063))
Gene LOC102621146
GeneID 102621146
Organism Citrus sinensis

Protein

Length 1174aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_025101735.1
Definition tRNA ligase 1-like isoform X2 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category S
Description atrnl,rnl
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003972        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006388        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008452        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010069        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042245        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGCATCGCAGAGAATCGTCTTCTGCGCTTTCACCCTCACTCATTCAAGAGCCTTCTGCTTGCGTCGTTCCTCGACGTCGTCGCTTCGCTGCTATCTGCCCCTAGCTCGTGCTCGTTCTCTCACTTTCACTTCCTCCGTTTCACCAATCATGTCTTACAATCAGAGAAGAGGTGGGCATAGTCAACAGCTGTGGAAACAGAAGCCAGTGACGGACACGCCATCTTCAGAGGTGGAGGGTGTATCTTCTTCTGGTGCTGAAGCTGTCACTAATGGAATTAGCGGGTTGAGTATTGCTGAAAATGATGGGCAATCTTCTGTTCCATCCACTGGATTTGGCAGTTTCCAACTACCAAACCAGAGTCCCACGCAAGGTCAAAAAGCAATTTGGAAGCCTAAATCATATGGAACAGTGAGTGGACAGACATCTGCAGAAGTAGGAAATTTACCTGCTGATGATACTGCTACTGCAATCAAGGGGAATGCATCTGAGATGACAACGGCACAAAAAAGCAGAATGGATTTAAGTAAATTATTCAGGGGTAATCTGTTGGAAAATTTTACTGTGGACAACTCAACATATTCACTTGCTGAAATTAGGATGAGGATGGTAGAGGTGGTATCTAATGGTCTGGCTGCTGTGGAGGTTACACTTAAGCATTCTGGTTCCCTTTTCATGTATGCTGGCCACAAGGGTGGAGCTTATGCCAAGAATAGCTTTGGCAATGTATACACTGCTGTTGGTGTTTTTGTCCTTGGACGGATGCTTCGGGAGGCATGGGGTGCTCAAGCGCTTAAAAAGCAAGTTGAATTCAATGATTTTCTTGAGAAAAATCGTATGTGCATCTCAATGGAGCTGGTGACTGCTGTTTTAGGAGACCATGGACAGCGCCCTCGAGAAGATTATGCGGTGGTGACTGCAGTCACAGAATTAGGAAATGGGAAGCCAAAGTTTTATTCTACTCCTGAAATAATTGCTTTTTGTCGGAAGTGGCGTTTACCAACAAATCATGTGTGGCTGTTCTCAACTAGGAAATCAGTTACTTCATTCTTTGCGGCTTACGATGCACTCTGTGAAGAAGGAACAGCAACTTCTGTTTGTAAGGCTCTCGATGATGTTGCTGATATTTCAGTACCAGGTTCTAAAGATCATATTCAGGTACAAGGCGAAATATTAGAGGGTCTCGTGGCTCGCATTGTTAGCCATGAGTGCTCACAGCACATGGAGGAGGTCTTGAGAGATTATCCTCCACCACCAGTTGAGGGAGCTGGCCTTGATTTGGGACCAAGCCTGAGGGAAATTTGTGCTGCAAATAGGTCCGATGAAAAGCAGCAAATAAAAGCGCTTCTTCAGAGTGTTGGCTCATCTTTTTGCCCCGACCATTCAGACTGGTTTGGCGTTGAAGCCGGTGGTACCCATTCAAGAAATGCAGACAGATCTGTTCTTACAAAATTTTTGCATGCTCATCCTGCTGATTTTTCAACCACTAAGTTGCAGGAAATGATTCGTTTGATGCGAGACAAGCGTTTCCCTGCTGCCTTTAAACTTTATCATAACTTCCACAAACTTGACTCTGTTTCAAATGACAACCTTTTCTACAAAATGGTCATTCATGTCCATAGTGACTCCGTTTTTAGGCGATACCAGAAAGAGATGAGGCATAGGCCCGGCCTGTGGCCATTGTATCGAGGTTTCTTTGTCGATATAAATCTATTCAAGGCAAACAAGGAAAGAGATGCTGAAATTGCCAGAAACAATAATCTGGAGAAAACTGTTAGTGGTAATGGTGGTGTGTCAGGAACAGATGGCTTGGCTAATGAGGATGAAAATTTGATGATCAAATTGAAGTTCCTCACTTATAAGTTGAGAACATTTCTCATCCGAAATGGCTTGTCAACTCTTTTCAAGGATGGTCCTTCTGCCTACAAGGCCTACTACCTGAGGCAAATGAATATTTGGGGCACTTCTGCAGTAAAGCAAAGACAACTTAGCAAGATGCTAGATGAATGGGCCGTGTACATACGGAGGAAGTACGGAAACAAGCAGTTGTCATCATCTGTATACCTTACTGAAGCTGAGCCCTTCCTTGAACAGTATGCTAGACGCAGTCCGGAGAATCAGGTTCTGATAGGATCTGCTGGAAACTTAGTGAGGGTTGAGGAATTCCTGGCTGTTATTGAAGGGGGCAGGGATGAAGAGGGTGATCTTGAGACTGAGCGGGAGGCACCGCCATCAAGCCCTAGACAAGCGAAGGATGAAGTTCAGAAAGATGAGGGTTTGATAGTTTTCTTTCCTGGAATACCTGGTTGTGCTAAGTCAGCACTTTGCAAGGAGTTACTAAATGCACCAGGAGGTCTTGGAGATAATAGGCCCATCCATACTTTGATGGGGGACCTTACAAAAGGAAAATACTGGCAGAAGGTTGCTGATGAGCGCAGGAGAAAACCATATTCTGTAATGCTTGCAGACAAGAATGCACCAAATGAAGAAGTCTGGAGACAGATTGAGGACATGTGCCGTCGCACCAGAACCTCTGCAGTTCCTGTTGTTCCTGATTCTGGAGGGACTGAGTCCAATCCATTTTCTCTCGATGCATTAGCTGTTTTTATGTTCCGTGTGCTTGAAAGAGTTAATCATCCGGGGAATCTTGACAAGAACTCTCCTAATGCTGGTTATGTTCTGCTAATGTTTTATCACCTTTATGAGGGCAAGAGCCGTAAAGAATTCGATGGTGAATTAGTTGAACGTTTCGGTTCTCTCATCAAAATGCCGTTGTTGAAAGATGATAGGAGTCCTCTGCCTGATCATGTGAGGTCTGTTCTGGAGGAGGGTATAAGCTTGTACAAGCTTCACACAAGCAAACATGGAAGATTGGAATCCACCAAAGGATCATATGCACAGGAGTGGGCTAAATGGGAAAAGCAGATGCGAGAGACTTTATTTGGCAATGCTGACTATCTTCAATCTATTCAGGTTCCATTTGAGTCTGCTGCCAAGCAAGTGTTGGAACAACTAAAGCTTATTGCCAAGGGTGAATATAAGGCACCAAGTACTGAGAAGAGGAACTTTGGAACCATTGTTTTTGCCGCTGTTAGTTTGCCTGTTACAGAGATCCAAAGTCTCCTTGTAGAATTGGCTGGCAAAGATCCGACCATTGATCTCTTTGTCAAAGAGGACTTGGAGCGTAACCTGAAGAAGGCCCATGTTACTCTTGCTCACAAGAGAAGTCACGGTGTTACAGCTGTAGCTAGTTATGGACCATACGTCAATCGAAATGTTCCTGTAGAATTGACTTCTTTGCTCTTCACTGACAAAATGGCTGCATTCGAGGCTCATCTTGGTTCTGTTGATGACGAAAAGATAGTTTCTAAAAATCAGTGGCCCCATGTCACCATATGGACTGGAGTGGGAGTTATTCCTAAGGAGGCAAACATGTTACCACAATTGCATTCAGAGGGCAAGGCCACCCTTATTGAAATAAATCCTCCATTTACTATCTCGGGCACACTGGAATTTTATTAA
Protein:  
MSASQRIVFCAFTLTHSRAFCLRRSSTSSLRCYLPLARARSLTFTSSVSPIMSYNQRRGGHSQQLWKQKPVTDTPSSEVEGVSSSGAEAVTNGISGLSIAENDGQSSVPSTGFGSFQLPNQSPTQGQKAIWKPKSYGTVSGQTSAEVGNLPADDTATAIKGNASEMTTAQKSRMDLSKLFRGNLLENFTVDNSTYSLAEIRMRMVEVVSNGLAAVEVTLKHSGSLFMYAGHKGGAYAKNSFGNVYTAVGVFVLGRMLREAWGAQALKKQVEFNDFLEKNRMCISMELVTAVLGDHGQRPREDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSVTSFFAAYDALCEEGTATSVCKALDDVADISVPGSKDHIQVQGEILEGLVARIVSHECSQHMEEVLRDYPPPPVEGAGLDLGPSLREICAANRSDEKQQIKALLQSVGSSFCPDHSDWFGVEAGGTHSRNADRSVLTKFLHAHPADFSTTKLQEMIRLMRDKRFPAAFKLYHNFHKLDSVSNDNLFYKMVIHVHSDSVFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKERDAEIARNNNLEKTVSGNGGVSGTDGLANEDENLMIKLKFLTYKLRTFLIRNGLSTLFKDGPSAYKAYYLRQMNIWGTSAVKQRQLSKMLDEWAVYIRRKYGNKQLSSSVYLTEAEPFLEQYARRSPENQVLIGSAGNLVRVEEFLAVIEGGRDEEGDLETEREAPPSSPRQAKDEVQKDEGLIVFFPGIPGCAKSALCKELLNAPGGLGDNRPIHTLMGDLTKGKYWQKVADERRRKPYSVMLADKNAPNEEVWRQIEDMCRRTRTSAVPVVPDSGGTESNPFSLDALAVFMFRVLERVNHPGNLDKNSPNAGYVLLMFYHLYEGKSRKEFDGELVERFGSLIKMPLLKDDRSPLPDHVRSVLEEGISLYKLHTSKHGRLESTKGSYAQEWAKWEKQMRETLFGNADYLQSIQVPFESAAKQVLEQLKLIAKGEYKAPSTEKRNFGTIVFAAVSLPVTEIQSLLVELAGKDPTIDLFVKEDLERNLKKAHVTLAHKRSHGVTAVASYGPYVNRNVPVELTSLLFTDKMAAFEAHLGSVDDEKIVSKNQWPHVTIWTGVGVIPKEANMLPQLHSEGKATLIEINPPFTISGTLEFY